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basic local alignment search tool (blast) program tblastn  (Biotechnology Information)

 
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    Biotechnology Information basic local alignment search tool (blast) program tblastn
    Basic Local Alignment Search Tool (Blast) Program Tblastn, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+(blast)+program+tblastn/basic+local+alignment+search+tool++blast+/pmc05717512-268-1-21
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool (blast) program tblastn - by Bioz Stars, 2026-09
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    Article Title: Identification of putative neuropeptidergic signaling systems in the spiny lobster, Panulirus argus.
    Article Snippet: Members of the decapod infraorder Achelata, specifically species from the genus Panulirus, have storied histories as models for investigating the basic principles governing the generation, maintenance, and modulation of rhythmic motor behavior, including modulation by locally released and circulating peptides.. Despite their contributions to our understanding of peptidergic neuromodulation, little is known about the identity of the native neuropeptides and neuronal peptide receptors present in these crustaceans.. Here, a Panulirus argus nervous system-specific transcriptome was used to help fill this void, providing insight into the neuropeptidome and neuronal peptide receptome of this species.

    Article Title: The transcription factor CREB3-2 regulated neutral lipase gene expression in ovary of Nilaparvata lugens.
    Article Snippet: The cyclic AMP-responsive element-binding protein 3 (CREB3) members have unique regulatory roles in cellular lipid metabolism as transcription factors.. Two CREB3 proteins in Nilaparvata lugens were identified and analyzed.. In ovary, when silencing NlCREB3–2, triacylglycerol (TAG) content dramatically increased but glycerol and free fatty acid (FFA) significantly decreased, which implicated that NlCREB3–2 was involved in the lipase-related TAG metabolism.

    Article Title: Mining Lygus hesperus (western tarnished plant bug) transcriptomic data for transient receptor potential channels: Expression profiling and functional characterization of a Painless homolog.
    Article Snippet: The transient receptor potential (TRP) family of cation channels are evolutionarily conserved proteins with critical roles in sensory physiology.. Despite extensive studies in model species, knowledge of TRP channel functional diversity and physiological impact remains limited in many non-model insect species.. To assess the TRP channel repertoire in a non-model agriculture pest species (Lygus hesperus), publicly available transcriptomic datasets were mined for potential homologs.

    Article Title: Identification of the molecular components of a putative Jasus edwardsii (Crustacea; Decapoda; Achelata) circadian signaling system.
    Article Snippet: Like all organisms, members of the crustacean order Decapoda must coordinate their physiology and behavior to accommodate recurring patterns of environmental change.. Genetically encoded biological clocks are responsible, at least in part, for the proper timing of these organism-environment patternings.. While biological clocks cycling on a wide range of timescales have been identified, the circadian signaling system, which serves to coordinate physiological/behavioral events to the solar day, is perhaps the best known and most thoroughly investigated.

    Article Title: Does Differential Receptor Distribution Underlie Variable Responses to a Neuropeptide in the Lobster Cardiac System?
    Article Snippet: To reassess the complement of ASTCRs in H. americanus , the three Homam-ASTCRs previously identified and sequences from six additional arthropods annotated as ASTCRs or somatostatin receptor-like proteins ( ) were used with the online program tBLASTn (National Center for Biotechnology Information, Bethesda, MD; http://blast.ncbi.nlm.nih.gov/Blast.cgi , accessed on 7 June 2021) to query H. americanus specific transcriptome shotgun assembly (TSA) datasets (Bioproject accessions 412549, 379629, 338672, and 300643).

    Article Title: Assessment and comparison of putative amine receptor complement/diversity in the brain and eyestalk ganglia of the lobster, Homarus americanus.
    Article Snippet: In brief, the database of the online program tblastn (National Center for Biotechnology Information, Bethesda, MD; https :// blast .ncbi.nlm.nih.gov/Blast .cgi) was set to Transcriptome Invertebrate Neuroscience (2020) 20:7 1 3 Page 3 of 14 7 Shotgun Assembly (TSA) and restricted to data from the H. americanus brain- (BioProject No. PRJNA379629; Christie et al. 2018a) and eyestalk ganglia-specific (BioProject No. PRJNA338672; Christie et al. 2017) transcriptomes.

    Article Title: Assessment and comparison of putative amine receptor complement/diversity in the brain and eyestalk ganglia of the lobster, Homarus americanus
    Article Snippet: In brief, the database of the online program tblastn (National Center for Biotechnology Information, Bethesda, MD; http://blast.ncbi.nlm.nih.gov/Blast.cgi ) was set to Transcriptome Shotgun Assembly (TSA) and restricted to data from the H. americanus brain- ( BioProject No. PRJNA379629 ; Christie et al., 2018a ) and eyestalk ganglia-specific ( BioProject No. PRJNA338672 ; Christie et al., 2017 ) transcriptomes.

    Article Title: How Many Sirtuin Genes Are Out There? Evolution of Sirtuin Genes in Vertebrates With a Description of a New Family Member
    Article Snippet: In addition, we complemented our sampling by retrieving sequences from vertebrate groups that were not present or poorly represented in the OMA project (e.g., crocodiles) from the National Center for Biotechnology Information (NCBI; ) using the program blast (tblastn) with default parameters ( ; online).



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    Biotechnology Information basic local alignment search tool (blast) program tblastn
    Basic Local Alignment Search Tool (Blast) Program Tblastn, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+(blast)+program+tblastn/basic+local+alignment+search+tool++blast+/pmc05717512-268-1-21
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool (blast) program tblastn - by Bioz Stars, 2026-09
    90/100 stars
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